- GeneQuery - a webserver for transcriptome-based hypothesis generation.
- ClusDec - an R package to perform de novo deconvolution of transcriptomic experiments in absence of reference gene signatures or cell type/count knowledge.
- BroadPeaks - re-implementation of SICER algorithm for broad peak calling in appropriate ChIP-Seq experiments.
- Washington University in St Louis, Maxim Artyomov laboratory
- Yale University, Vishwa Deep Dixit laboratory
- IFMO, Genome Assembly Algorithms Laboratory
- Federal Almazov North-West Medical Research Centre
- Institute of Cytology of RAS (SPb), Dmitry Tentler laboratory